Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000003835PDEase domain-containing protein. (55 aa)    
Predicted Functional Partners:
LOC103175521
Uncharacterized protein.
   
 0.723
rps12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
   0.539
prkx
Uncharacterized protein.
   
 0.488
apaf1
Uncharacterized protein.
      
 0.476
pde5a
Phosphodiesterase.
    
 0.470
rhobtb2
Uncharacterized protein.
    
  0.469
rhobtb1
Rho-related BTB domain-containing protein 1.
    
  0.469
pde1a
Phosphodiesterase.
   
 0.448
pde1c
Phosphodiesterase.
   
 0.448
pde8b
Phosphodiesterase.
    
 0.433
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.