Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zmynd11Uncharacterized protein. (620 aa)    
Predicted Functional Partners:
deaf1
Uncharacterized protein.
   
  
 0.701
traf6
TNF receptor-associated factor.
    
 
 0.679
setd5
SET domain-containing protein.
      
 0.678
eftud2
Tr-type G domain-containing protein.
    
 
 0.659
scfd1
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.652
ENSCMIP00000001884
Uncharacterized protein.
      
 0.630
kmt2a
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
   
 
 0.626
pnn
Pinin.
    
   0.610
Srsf9
Uncharacterized protein.
    
 
 0.610
ENSCMIP00000017993
Uncharacterized protein.
      
 0.597
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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