Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103188128Uncharacterized protein. (447 aa)    
Predicted Functional Partners:
c1galt1
Uncharacterized protein.
    
 0.944
B3gnt3
Hexosyltransferase.
     
 0.934
C1galt1c1
C1GALT1-specific chaperone 1-like protein.
    
 0.933
st3gal2
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.930
LOC103189009
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.930
b4galt5
Uncharacterized protein.
    
 0.926
LOC103175572
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.923
gcnt1
Uncharacterized protein.
  
  
 
0.903
galnt3
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.757
galnt6
Ricin B-type lectin domain-containing protein.
     
 0.757
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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