STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000003951Uncharacterized protein. (144 aa)    
Predicted Functional Partners:
LOC103190512
Uncharacterized protein.
 
  
 
0.940
ENSCMIP00000017623
Uncharacterized protein.
 
   
  0.933
ENSCMIP00000017631
Ion_trans domain-containing protein.
 
     0.914
catsperb
Uncharacterized protein.
    
 0.696
catsperg
Uncharacterized protein.
    
 0.689
catsper2
Ion_trans domain-containing protein.
   
 0.687
Catsperd
Uncharacterized protein.
    
 0.671
nsun2
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
      0.626
catsper3
Ion_trans domain-containing protein.
   
 0.532
LOC103172036
Ion_trans domain-containing protein.
   
 0.531
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.