Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103173705Tyrosine-protein phosphatase domain-containing protein. (139 aa)    
Predicted Functional Partners:
pstpip1
Proline-serine-threonine phosphatase-interacting protein 1-like protein.
   
 
 0.788
Shc3
PID domain-containing protein.
    
 0.757
shc4
Uncharacterized protein.
    
 0.757
matk
Tyrosine-protein kinase.
   
 0.743
csk
Tyrosine-protein kinase.
   
 0.743
pstpip2
Proline-serine-threonine phosphatase-interacting protein 2-like protein.
   
 
 0.718
erbb3
Protein kinase domain-containing protein.
    
 0.622
erbb2
Receptor protein-tyrosine kinase.
    
 0.622
erbb4
Receptor protein-tyrosine kinase.
    
 0.622
egfr
Receptor protein-tyrosine kinase.
    
 0.622
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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