Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ctdnep1FCP1 homology domain-containing protein. (243 aa)    
Predicted Functional Partners:
cnep1r1
Uncharacterized protein.
   
 0.885
lpin1
LNS2 domain-containing protein.
    
 0.834
lpin3
LNS2 domain-containing protein.
    
 0.834
lpin2
LNS2 domain-containing protein.
    
 0.834
mal2
MARVEL domain-containing protein.
      
 0.637
kbtbd4
Kelch repeat and BTB domain-containing protein 4-like protein.
   
  
 0.634
polr3a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
  
   0.613
slc35g2
Transmembrane protein 22.
      
 0.587
gtf2f2
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
    
 0.565
polr2g
Uncharacterized protein.
    
 0.559
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: medium (52%) [HD]