Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pla2g12aUncharacterized protein. (130 aa)    
Predicted Functional Partners:
LOC103190668
Phospholipase A(2).
     
 0.990
LOC103188674
Phospholipase A(2).
     
 0.959
LOC103189864
Phospholipase A(2).
     
 0.959
proca1
PA2c domain-containing protein.
     
 0.959
ENSCMIP00000004237
PA2c domain-containing protein.
     
 0.955
LOC103188680
Phospholipase A(2).
     
 0.938
pisd
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
     
 0.930
pla2g4a
Phospholipase A2.
     
 0.925
LOC103189875
Cytosolic phospholipase A2 gamma-like protein.
     
 0.921
ptdss1
Phosphatidylserine synthase 1.
     
 0.913
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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