Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103173721Uncharacterized protein. (300 aa)    
Predicted Functional Partners:
gss
Glutathione synthetase.
   
 
 0.963
ggct
Uncharacterized protein.
     
 0.944
gclc
Uncharacterized protein.
   
 
 0.927
gsr
Uncharacterized protein.
     
 0.924
lap3
CYTOSOL_AP domain-containing protein.
     
 0.921
anpep
Aminopeptidase.
     
 0.920
LOC103172667
Uncharacterized protein.
    
 0.915
chac2
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
   
 
 0.909
ltc4s
Leukotriene C4 synthase.
     
 0.909
gclm
Uncharacterized protein.
   
 
 0.909
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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