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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172027ANK_REP_REGION domain-containing protein. (168 aa)    
Predicted Functional Partners:
cdk4
Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily.
    
 0.934
LOC103183765
Cell division protein kinase 6; Belongs to the protein kinase superfamily.
    
 0.934
cdk6
Protein kinase domain-containing protein.
    
 0.934
ccnd2
Cyclin_C domain-containing protein; Belongs to the cyclin family.
    
 0.923
ENSCMIP00000047503
Uncharacterized protein.
  
 
  0.454
ift81
IFT81_CH domain-containing protein.
    
 0.453
nfkbia
ANK_REP_REGION domain-containing protein.
  
     0.437
ift22
Rab-like protein 5.
    
 0.410
ift88
Uncharacterized protein.
    
 0.409
ENSCMIP00000009894
ANK_REP_REGION domain-containing protein.
  
     0.406
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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