ENSCMIP00000004082 protein (Callorhinchus milii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCMIP00000004082

Uncharacterized protein. (126 aa)

Predicted Functional Partners:

LOC103173966

0.947

ENSCMIP00000005149

0.944

ENSCMIP00000005146

0.940

LOC103172816

0.934

phb2

0.757

ccdc167

0.467

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000004082	ENSCMIP00000005146	ENSCMIP00000004082	ENSCMIP00000005146	Uncharacterized protein.	Uncharacterized protein.	0.940
ENSCMIP00000004082	ENSCMIP00000005149	ENSCMIP00000004082	ENSCMIP00000005149	Uncharacterized protein.	Uncharacterized protein.	0.944
ENSCMIP00000004082	LOC103172816	ENSCMIP00000004082	ENSCMIP00000002714	Uncharacterized protein.	Uncharacterized protein.	0.934
ENSCMIP00000004082	LOC103173966	ENSCMIP00000004082	ENSCMIP00000005850	Uncharacterized protein.	Uncharacterized protein.	0.947
ENSCMIP00000004082	ccdc167	ENSCMIP00000004082	ENSCMIP00000001916	Uncharacterized protein.	Uncharacterized protein.	0.467
ENSCMIP00000004082	phb2	ENSCMIP00000004082	ENSCMIP00000005520	Uncharacterized protein.	Prohibitin.	0.757
ENSCMIP00000005146	ENSCMIP00000004082	ENSCMIP00000005146	ENSCMIP00000004082	Uncharacterized protein.	Uncharacterized protein.	0.940
ENSCMIP00000005146	ENSCMIP00000005149	ENSCMIP00000005146	ENSCMIP00000005149	Uncharacterized protein.	Uncharacterized protein.	0.894
ENSCMIP00000005146	LOC103172816	ENSCMIP00000005146	ENSCMIP00000002714	Uncharacterized protein.	Uncharacterized protein.	0.925
ENSCMIP00000005146	LOC103173966	ENSCMIP00000005146	ENSCMIP00000005850	Uncharacterized protein.	Uncharacterized protein.	0.930
ENSCMIP00000005146	ccdc167	ENSCMIP00000005146	ENSCMIP00000001916	Uncharacterized protein.	Uncharacterized protein.	0.467
ENSCMIP00000005146	phb2	ENSCMIP00000005146	ENSCMIP00000005520	Uncharacterized protein.	Prohibitin.	0.757
ENSCMIP00000005149	ENSCMIP00000004082	ENSCMIP00000005149	ENSCMIP00000004082	Uncharacterized protein.	Uncharacterized protein.	0.944
ENSCMIP00000005149	ENSCMIP00000005146	ENSCMIP00000005149	ENSCMIP00000005146	Uncharacterized protein.	Uncharacterized protein.	0.894
ENSCMIP00000005149	LOC103172816	ENSCMIP00000005149	ENSCMIP00000002714	Uncharacterized protein.	Uncharacterized protein.	0.823
ENSCMIP00000005149	LOC103173966	ENSCMIP00000005149	ENSCMIP00000005850	Uncharacterized protein.	Uncharacterized protein.	0.915
ENSCMIP00000005149	ccdc167	ENSCMIP00000005149	ENSCMIP00000001916	Uncharacterized protein.	Uncharacterized protein.	0.467
ENSCMIP00000005149	phb2	ENSCMIP00000005149	ENSCMIP00000005520	Uncharacterized protein.	Prohibitin.	0.757
LOC103172816	ENSCMIP00000004082	ENSCMIP00000002714	ENSCMIP00000004082	Uncharacterized protein.	Uncharacterized protein.	0.934
LOC103172816	ENSCMIP00000005146	ENSCMIP00000002714	ENSCMIP00000005146	Uncharacterized protein.	Uncharacterized protein.	0.925