STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103190178Uncharacterized protein. (948 aa)    
Predicted Functional Partners:
gpi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 0.966
pgm1
Uncharacterized protein; Belongs to the phosphohexose mutase family.
   
 
 0.937
mpi
Mannose-6-phosphate isomerase.
    
 0.934
pgm2
Uncharacterized protein.
   
 
 0.930
gnpnat1
Glucosamine 6-phosphate N-acetyltransferase.
   
 0.925
amdhd2
N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
   
 
 0.924
LOC103188177
FBPase domain-containing protein; Belongs to the FBPase class 1 family.
   
 
 0.922
LOC103188178
Fructose-1,6-bisphosphatase 1; Belongs to the FBPase class 1 family.
   
 
 0.922
pmm2
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
   
 
 0.922
gnpda1
Glucosamine-6-phosphate isomerase.
   
 
 0.922
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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