Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000004100Uncharacterized protein. (309 aa)    
Predicted Functional Partners:
cenpc
CENP-C_C domain-containing protein.
     
 0.839
cenpn
Uncharacterized protein.
     
 0.708
cenpm
Uncharacterized protein.
     
 0.654
cenpp
Centromere protein P.
     
 0.639
ENSCMIP00000004349
Somatostatin domain-containing protein.
     
 0.624
cenpi
Uncharacterized protein.
     
 0.606
cenpl
Uncharacterized protein.
     
  0.541
chat
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
     
  0.541
mttp
Vitellogenin domain-containing protein.
     
  0.541
LOC103187768
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
      
 0.463
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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