ccdc12 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ccdc12

Uncharacterized protein. (117 aa)

Predicted Functional Partners:

cdc40

0.998

cdc5l

0.972

srrm1

0.959

syf2

0.959

eftud2

0.956

ppil3

0.955

ppil2

0.942

ddx39a

0.940

wdr25

0.939

ppwd1

0.936

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ccdc12	cdc40	ENSCMIP00000004126	ENSCMIP00000037798	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.998
ccdc12	cdc5l	ENSCMIP00000004126	ENSCMIP00000023381	Uncharacterized protein.	Cell division cycle 5-like protein.	0.972
ccdc12	ddx39a	ENSCMIP00000004126	ENSCMIP00000047160	Uncharacterized protein.	Uncharacterized protein.	0.940
ccdc12	eftud2	ENSCMIP00000004126	ENSCMIP00000019319	Uncharacterized protein.	Tr-type G domain-containing protein.	0.956
ccdc12	ppil2	ENSCMIP00000004126	ENSCMIP00000032638	Uncharacterized protein.	Uncharacterized protein.	0.942
ccdc12	ppil3	ENSCMIP00000004126	ENSCMIP00000033172	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.955
ccdc12	ppwd1	ENSCMIP00000004126	ENSCMIP00000046316	Uncharacterized protein.	Peptidylprolyl isomerase domain and WD repeat-containing protein 1.	0.936
ccdc12	srrm1	ENSCMIP00000004126	ENSCMIP00000032567	Uncharacterized protein.	PWI domain-containing protein.	0.959
ccdc12	syf2	ENSCMIP00000004126	ENSCMIP00000032632	Uncharacterized protein.	Uncharacterized protein.	0.959
ccdc12	wdr25	ENSCMIP00000004126	ENSCMIP00000036319	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.939
cdc40	ccdc12	ENSCMIP00000037798	ENSCMIP00000004126	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.998
cdc40	cdc5l	ENSCMIP00000037798	ENSCMIP00000023381	WD_REPEATS_REGION domain-containing protein.	Cell division cycle 5-like protein.	0.994
cdc40	ddx39a	ENSCMIP00000037798	ENSCMIP00000047160	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.914
cdc40	eftud2	ENSCMIP00000037798	ENSCMIP00000019319	WD_REPEATS_REGION domain-containing protein.	Tr-type G domain-containing protein.	0.993
cdc40	ppil2	ENSCMIP00000037798	ENSCMIP00000032638	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.945
cdc40	ppil3	ENSCMIP00000037798	ENSCMIP00000033172	WD_REPEATS_REGION domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.948
cdc40	ppwd1	ENSCMIP00000037798	ENSCMIP00000046316	WD_REPEATS_REGION domain-containing protein.	Peptidylprolyl isomerase domain and WD repeat-containing protein 1.	0.971
cdc40	srrm1	ENSCMIP00000037798	ENSCMIP00000032567	WD_REPEATS_REGION domain-containing protein.	PWI domain-containing protein.	0.974
cdc40	syf2	ENSCMIP00000037798	ENSCMIP00000032632	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999
cdc5l	ccdc12	ENSCMIP00000023381	ENSCMIP00000004126	Cell division cycle 5-like protein.	Uncharacterized protein.	0.972