Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
LOC103179140Protein kinase domain-containing protein. (122 aa)    
Predicted Functional Partners:
ddx6
Putative ATP-dependent RNA helicase DDX6-like protein; Belongs to the DEAD box helicase family.
    
 
 0.771
edc3
Uncharacterized protein.
    
   0.753
dcp1a
mRNA_decap_C domain-containing protein.
    
   0.753
Dcp1b
Uncharacterized protein.
    
   0.639
ENSCMIP00000048176
Uncharacterized protein.
    
   0.639
rptor
WD_REPEATS_REGION domain-containing protein.
    
 0.592
prkab1
5'-AMP-activated protein kinase subunit beta-1-like protein.
    
 0.515
LOC103179976
Protein kinase, AMP-activated, beta 2 non-catalytic subunit.
    
 0.515
wdr90
Uncharacterized protein.
    
 0.489
ivns1abp
Influenza virus NS1A-binding protein-like protein.
      
 0.481
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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