Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ube2wUBIQUITIN_CONJUGAT_2 domain-containing protein. (174 aa)    
Predicted Functional Partners:
stub1
E3 ubiquitin-protein ligase CHIP.
    
 0.973
rnf4
Ring finger protein 4.
    
 0.920
ENSCMIP00000010820
RING-type domain-containing protein.
    
 0.914
brca1
Uncharacterized protein.
    
 0.914
bard1
Uncharacterized protein.
    
 0.904
trip12
Putative E3 ubiquitin-protein ligase TRIP12.
    
 0.896
LOC103173873
UBA_e1_C domain-containing protein.
   
 0.872
uba6
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.872
uba7
UBA_e1_C domain-containing protein.
   
 0.872
ube2h
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.859
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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