Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
sec23aProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (771 aa)    
Predicted Functional Partners:
sec13
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.983
sec24c
Uncharacterized protein.
   
0.982
sec24d
Uncharacterized protein.
   
0.978
sec31a
WD_REPEATS_REGION domain-containing protein.
   
 0.968
sec31b
WD_REPEATS_REGION domain-containing protein.
   
 0.968
LOC103190869
Uncharacterized protein.
   
0.960
sec24a
Uncharacterized protein.
   
0.960
rpl12
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
 
      0.899
sar1a
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.889
sar1b
GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.889
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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