Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tmem70Uncharacterized protein. (145 aa)    
Predicted Functional Partners:
ndufs5
NADH dehydrogenase (Ubiquinone) iron-sulfur protein 5.
    
 
 0.965
atpaf2
ATP synthase mitochondrial F1 complex assembly factor 2.
   
  
 0.870
mrpl49
39S ribosomal protein L49, mitochondrial-like protein.
   
  
 0.850
mterf4
mTERF domain-containing protein 2-like protein.
      
 0.819
rhbdd1
Rhomboid domain-containing protein.
      
 0.769
tmem214
Uncharacterized protein.
      
 0.754
rmnd1
DUF155 domain-containing protein.
   
  
 0.707
tmem242
Uncharacterized protein.
      
 0.683
ENSCMIP00000037469
Uncharacterized protein.
      
 0.682
foxred1
DAO domain-containing protein.
      
 0.674
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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