Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000004257Histone H2B; Belongs to the histone H2B family. (126 aa)    
Predicted Functional Partners:
h3f3b
Histone domain-containing protein.
 
 
 0.956
uba52
Ribosomal protein L40-like isoform 1.
    
 0.955
LOC103172042
Histone H2A; Belongs to the histone H2A family.
 
 0.928
ENSCMIP00000011655
Histone H2A; Belongs to the histone H2A family.
 
 0.926
ENSCMIP00000047395
Histone H2A; Belongs to the histone H2A family.
 
 0.922
ENSCMIP00000011641
Histone H3; Belongs to the histone H3 family.
 
 
 0.921
LOC103173215
Histone H3; Belongs to the histone H3 family.
 
 
 0.916
rps27a
Ubiquitin-like domain-containing protein.
   
 0.911
h3f3a
Histone domain-containing protein.
 
 
 0.907
LOC103187764
Histone H2A; Belongs to the histone H2A family.
   
 0.892
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.