STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000004265Kri1_C domain-containing protein. (239 aa)    
Predicted Functional Partners:
LOC103185938
Uncharacterized protein.
   
 
 0.827
krr1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.827
LOC103179855
Uncharacterized protein.
   
 
 0.827
nop14
Uncharacterized protein.
   
 
 0.790
utp23
Uncharacterized protein.
   
 
 0.762
esf1
NUC153 domain-containing protein.
   
  
 0.757
pop1
Uncharacterized protein.
   
   0.722
utp14a
Uncharacterized protein.
   
 
 0.721
utp3
Something about silencing protein 10-like protein.
   
  
 0.715
ddx27
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.712
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (20%) [HD]