Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000004307Uncharacterized protein. (78 aa)    
Predicted Functional Partners:
ipo5
Importin N-terminal domain-containing protein.
   
 
 0.927
kpnb1
Importin N-terminal domain-containing protein.
   
 
 0.906
ipo9
Importin N-terminal domain-containing protein.
   
 
 0.896
polr1a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.884
gmps
Uncharacterized protein.
   
    0.883
ipo11
Importin N-terminal domain-containing protein.
   
  
 0.883
asf1a
Uncharacterized protein.
   
 
 0.879
asf1b
Uncharacterized protein.
   
 
 0.879
tnpo2
Importin N-terminal domain-containing protein.
   
 
 0.872
tnpo1
Importin N-terminal domain-containing protein.
   
 
 0.872
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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