STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spsb1SPRY domain-containing SOCS box protein 1-like protein. (273 aa)    
Predicted Functional Partners:
eloc
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.920
cul5
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.756
mycbp2
Uncharacterized protein.
    
 
 0.644
elob
Ubiquitin-like domain-containing protein.
    
 0.613
cul1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.606
rnf7
RING-box protein 2-like protein.
    
 0.600
pawr
Uncharacterized protein.
    
 
 0.586
ccdc22
Uncharacterized protein.
   
 
  0.565
skp1
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.545
LOC103182116
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.545
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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