Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103173787Uncharacterized protein. (142 aa)    
Predicted Functional Partners:
LOC103190196
Uncharacterized protein; Belongs to the transferrin family.
  
 0.618
meltf
Uncharacterized protein; Belongs to the transferrin family.
  
 0.618
LOC103186509
Uncharacterized protein; Belongs to the transferrin family.
  
 0.618
LOC103186580
Transferrin-like domain-containing protein.
  
 0.618
rpa2
Replication protein A2, 32kDa.
    
 
 0.514
optn
Optineurin.
    
   0.512
grb2
Uncharacterized protein.
     
 0.498
sdha
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
      
 0.490
LOC103178972
Phosphoglycerate kinase.
  
  
 0.489
ppy
Peptide YY.
      
 0.485
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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