Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc25a33Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (303 aa)    
Predicted Functional Partners:
ENSCMIP00000032231
Uncharacterized protein.
      
 0.599
edf1
Endothelial differentiation-related factor 1.
    
   0.570
pum2
PUM-HD domain-containing protein.
    
   0.538
pum1
PUM-HD domain-containing protein.
    
   0.538
LOC103171635
SAM domain-containing protein.
      
 0.493
tmem201
Uncharacterized protein.
 
    
 0.484
Slc25a53
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.483
yme1l1
AAA domain-containing protein.
      
 0.482
gpr157
Uncharacterized protein.
      
 0.478
mdh1b
Ldh_1_C domain-containing protein.
   
  
 0.476
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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