Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
egr3Uncharacterized protein. (387 aa)    
Predicted Functional Partners:
egr2
Uncharacterized protein.
  
  
 
0.907
fos
Proto-oncogene c-Fos.
   
 0.811
ep300
Uncharacterized protein.
    
 0.767
jun
Jun domain-containing protein.
   
 0.756
fosb
Protein fosB-like protein.
   
 0.745
acsl5
Acyl-CoA synthetase long-chain family member 5.
    
 
 0.687
disp3
SSD domain-containing protein.
      
 0.686
LOC103183807
NGFI-A-binding protein 1-like protein.
    
 0.667
nab1
Uncharacterized protein.
    
 0.667
ENSCMIP00000008571
BHLH domain-containing protein.
   
  
 0.661
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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