dpp3 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

dpp3

Uncharacterized protein. (306 aa)

Predicted Functional Partners:

ENSCMIP00000003516

0.948

rnpep

0.692

ENSCMIP00000029420

0.651

lta4h

0.629

prep

0.624

ebag9

0.623

keap1

0.608

klhl17

0.608

ENSCMIP00000005010

0.571

xpnpep3

0.555

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000003516	ENSCMIP00000005010	ENSCMIP00000003516	ENSCMIP00000005010	Uncharacterized protein.	Uncharacterized protein.	0.608
ENSCMIP00000003516	ENSCMIP00000029420	ENSCMIP00000003516	ENSCMIP00000029420	Uncharacterized protein.	PALB2_WD40 domain-containing protein.	0.651
ENSCMIP00000003516	dpp3	ENSCMIP00000003516	ENSCMIP00000004416	Uncharacterized protein.	Uncharacterized protein.	0.948
ENSCMIP00000003516	ebag9	ENSCMIP00000003516	ENSCMIP00000023054	Uncharacterized protein.	Uncharacterized protein; May participate in suppression of cell proliferation and induces apoptotic cell death through activation of interleukin-1-beta converting enzyme (ICE)-like proteases.	0.623
ENSCMIP00000003516	keap1	ENSCMIP00000003516	ENSCMIP00000026800	Uncharacterized protein.	BTB domain-containing protein.	0.608
ENSCMIP00000003516	klhl17	ENSCMIP00000003516	ENSCMIP00000034477	Uncharacterized protein.	BTB domain-containing protein.	0.608
ENSCMIP00000003516	lta4h	ENSCMIP00000003516	ENSCMIP00000035574	Uncharacterized protein.	Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.	0.629
ENSCMIP00000003516	prep	ENSCMIP00000003516	ENSCMIP00000018069	Uncharacterized protein.	Uncharacterized protein.	0.624
ENSCMIP00000003516	rnpep	ENSCMIP00000003516	ENSCMIP00000002783	Uncharacterized protein.	Leuk-A4-hydro_C domain-containing protein.	0.692
ENSCMIP00000003516	xpnpep3	ENSCMIP00000003516	ENSCMIP00000011598	Uncharacterized protein.	AMP_N domain-containing protein.	0.555
ENSCMIP00000005010	ENSCMIP00000003516	ENSCMIP00000005010	ENSCMIP00000003516	Uncharacterized protein.	Uncharacterized protein.	0.608
ENSCMIP00000005010	dpp3	ENSCMIP00000005010	ENSCMIP00000004416	Uncharacterized protein.	Uncharacterized protein.	0.571
ENSCMIP00000005010	ebag9	ENSCMIP00000005010	ENSCMIP00000023054	Uncharacterized protein.	Uncharacterized protein; May participate in suppression of cell proliferation and induces apoptotic cell death through activation of interleukin-1-beta converting enzyme (ICE)-like proteases.	0.501
ENSCMIP00000005010	lta4h	ENSCMIP00000005010	ENSCMIP00000035574	Uncharacterized protein.	Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.	0.439
ENSCMIP00000005010	rnpep	ENSCMIP00000005010	ENSCMIP00000002783	Uncharacterized protein.	Leuk-A4-hydro_C domain-containing protein.	0.424
ENSCMIP00000029420	ENSCMIP00000003516	ENSCMIP00000029420	ENSCMIP00000003516	PALB2_WD40 domain-containing protein.	Uncharacterized protein.	0.651
ENSCMIP00000029420	dpp3	ENSCMIP00000029420	ENSCMIP00000004416	PALB2_WD40 domain-containing protein.	Uncharacterized protein.	0.651
ENSCMIP00000029420	keap1	ENSCMIP00000029420	ENSCMIP00000026800	PALB2_WD40 domain-containing protein.	BTB domain-containing protein.	0.740
ENSCMIP00000029420	klhl17	ENSCMIP00000029420	ENSCMIP00000034477	PALB2_WD40 domain-containing protein.	BTB domain-containing protein.	0.740
dpp3	ENSCMIP00000003516	ENSCMIP00000004416	ENSCMIP00000003516	Uncharacterized protein.	Uncharacterized protein.	0.948