Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000004468Uncharacterized protein. (67 aa)    
Predicted Functional Partners:
cd247
Uncharacterized protein.
   
 0.953
cd2
Ig-like domain-containing protein.
   
 0.771
syk
Tyrosine-protein kinase.
   
 0.765
zap70
Tyrosine-protein kinase.
   
 0.765
LOC103181487
Ig-like domain-containing protein.
   
 0.764
ENSCMIP00000027212
Ig-like domain-containing protein.
   
 
 0.718
vcp
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 
 0.641
ENSCMIP00000048067
Uncharacterized protein.
   
 
 0.621
sh2d1a
SH2 domain-containing protein 1A-like protein.
   
  
 0.608
ptprc
Uncharacterized protein.
   
 
 0.577
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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