pex2 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

pex2

RING-type domain-containing protein. (309 aa)

Predicted Functional Partners:

pex10

0.999

ENSCMIP00000040893

0.999

pex13

0.994

pex14

0.992

pex5l

0.969

pex7

0.957

LOC103181665

0.914

fam185a

0.901

pex16

0.887

pex1

0.861

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000040893	LOC103181665	ENSCMIP00000040893	ENSCMIP00000044416	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.966
ENSCMIP00000040893	fam185a	ENSCMIP00000040893	ENSCMIP00000034612	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	DUF4097 domain-containing protein.	0.929
ENSCMIP00000040893	pex1	ENSCMIP00000040893	ENSCMIP00000039987	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Uncharacterized protein.	0.975
ENSCMIP00000040893	pex10	ENSCMIP00000040893	ENSCMIP00000008859	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	RING-type domain-containing protein.	0.999
ENSCMIP00000040893	pex13	ENSCMIP00000040893	ENSCMIP00000011615	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	SH3 domain-containing protein.	0.998
ENSCMIP00000040893	pex14	ENSCMIP00000040893	ENSCMIP00000011851	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Pex14_N domain-containing protein.	0.998
ENSCMIP00000040893	pex16	ENSCMIP00000040893	ENSCMIP00000000890	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Peroxisomal membrane protein PEX16.	0.952
ENSCMIP00000040893	pex2	ENSCMIP00000040893	ENSCMIP00000004473	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	RING-type domain-containing protein.	0.999
ENSCMIP00000040893	pex5l	ENSCMIP00000040893	ENSCMIP00000005437	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	TPR_REGION domain-containing protein.	0.993
ENSCMIP00000040893	pex7	ENSCMIP00000040893	ENSCMIP00000038734	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	WD_REPEATS_REGION domain-containing protein.	0.969
LOC103181665	ENSCMIP00000040893	ENSCMIP00000044416	ENSCMIP00000040893	Uncharacterized protein; Belongs to the AAA ATPase family.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.966
LOC103181665	fam185a	ENSCMIP00000044416	ENSCMIP00000034612	Uncharacterized protein; Belongs to the AAA ATPase family.	DUF4097 domain-containing protein.	0.909
LOC103181665	pex1	ENSCMIP00000044416	ENSCMIP00000039987	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.997
LOC103181665	pex10	ENSCMIP00000044416	ENSCMIP00000008859	Uncharacterized protein; Belongs to the AAA ATPase family.	RING-type domain-containing protein.	0.968
LOC103181665	pex13	ENSCMIP00000044416	ENSCMIP00000011615	Uncharacterized protein; Belongs to the AAA ATPase family.	SH3 domain-containing protein.	0.982
LOC103181665	pex14	ENSCMIP00000044416	ENSCMIP00000011851	Uncharacterized protein; Belongs to the AAA ATPase family.	Pex14_N domain-containing protein.	0.982
LOC103181665	pex16	ENSCMIP00000044416	ENSCMIP00000000890	Uncharacterized protein; Belongs to the AAA ATPase family.	Peroxisomal membrane protein PEX16.	0.899
LOC103181665	pex2	ENSCMIP00000044416	ENSCMIP00000004473	Uncharacterized protein; Belongs to the AAA ATPase family.	RING-type domain-containing protein.	0.914
LOC103181665	pex5l	ENSCMIP00000044416	ENSCMIP00000005437	Uncharacterized protein; Belongs to the AAA ATPase family.	TPR_REGION domain-containing protein.	0.975
LOC103181665	pex7	ENSCMIP00000044416	ENSCMIP00000038734	Uncharacterized protein; Belongs to the AAA ATPase family.	WD_REPEATS_REGION domain-containing protein.	0.947