STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000004501NR LBD domain-containing protein. (217 aa)    
Predicted Functional Partners:
ENSCMIP00000031338
Nuclear receptor domain-containing protein.
 
      0.899
rxra
Uncharacterized protein.
    
 0.582
LOC103184778
Uncharacterized protein.
    
 0.582
nr1d2
Uncharacterized protein.
    
 0.548
ncor1
Uncharacterized protein.
    
 0.530
ENSCMIP00000033330
Uncharacterized protein.
    
 0.530
Ncor2
Uncharacterized protein.
    
 0.530
ep300
Uncharacterized protein.
    
 
 0.519
Bcl2
BH4_2 domain-containing protein.
   
 
 0.518
LOC103174353
Protein kinase domain-containing protein.
    
  0.475
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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