STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
baz1aUncharacterized protein. (1646 aa)    
Predicted Functional Partners:
pole3
DNA polymerase epsilon subunit 3-like protein.
    
 
 0.964
LOC103178664
Uncharacterized protein.
    
 0.951
LOC103180602
Uncharacterized protein.
    
 0.951
chrac1
Uncharacterized protein.
   
 
 0.854
hells
Uncharacterized protein.
    
 0.675
chd1l
Uncharacterized protein.
    
 0.675
ENSCMIP00000047847
Uncharacterized protein.
    
 0.675
mybbp1a
Uncharacterized protein.
    
 0.654
ercc6
Uncharacterized protein.
    
 0.647
sf3b1
TOG domain-containing protein.
   
 0.632
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.