Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
snphUncharacterized protein. (403 aa)    
Predicted Functional Partners:
tmem82
Uncharacterized protein.
      
 0.692
myo19
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.683
trak2
Uncharacterized protein.
      
 0.651
ntan1
Protein NH2-terminal asparagine amidohydrolase-like protein.
      
 0.650
LOC103184217
Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
   
  
 0.588
mff
Mitochondrial fission factor-like protein.
      
 0.526
cplx4
Uncharacterized protein.
      
 0.523
scamp1
Secretory carrier-associated membrane protein.
      
 0.516
ppp3r1
Uncharacterized protein.
      
 0.484
trak1
Uncharacterized protein.
      
 0.466
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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