STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubxn10UBX domain-containing protein 10. (273 aa)    
Predicted Functional Partners:
ubxn6
UBX domain-containing protein.
    
 
 0.964
aspscr1
UBX domain-containing protein.
    
 
 0.949
vcp
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 
 0.936
ift74
Uncharacterized protein.
    
 
 0.925
ttc26
Uncharacterized protein.
    
 
 0.923
ufd1
Ubiquitin fusion degradation protein 1-like protein.
    
 
 0.923
ift88
Uncharacterized protein.
    
   0.922
nsfl1c
Uncharacterized protein.
    
 
 0.781
ubxn2b
Uncharacterized protein.
    
 
 0.781
ENSCMIP00000044635
SEP domain-containing protein.
    
 
 0.689
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.