Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103182487Uncharacterized protein; Belongs to the glycosyl hydrolase 18 family. (552 aa)    
Predicted Functional Partners:
hexb
Beta-hexosaminidase.
    
 0.942
LOC103182484
Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
  
  
 
0.904
ENSCMIP00000027682
Uncharacterized protein.
   
 0.847
LOC103182668
Cytochrome c oxidase subunit VIIc.
   
 0.833
LOC103188980
Uncharacterized protein.
   
 0.821
LOC103181102
Uncharacterized protein.
   
 0.781
LOC103188994
Uncharacterized protein.
   
 0.781
LOC103175926
Cytochrome c oxidase subunit 4 isoform 1.
   
 0.780
COX2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
    
 0.762
COX3
Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.
    
  0.745
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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