Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
grin2bUncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1034 aa)    
Predicted Functional Partners:
grin1
Uncharacterized protein.
   
0.989
grin3a
Uncharacterized protein.
  
 
0.973
grin3b
Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
  
 
0.965
chrna7
Uncharacterized protein.
     
 0.902
p2rx2
Uncharacterized protein.
     
 0.902
LOC103177743
Uncharacterized protein.
     
 0.902
p2rx4
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
     
  0.900
grin2a
Uncharacterized protein.
     
 
0.900
grin2c
Uncharacterized protein.
     
 
0.900
ENSCMIP00000005193
Uncharacterized protein.
 
      0.899
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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