STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000004651VKc domain-containing protein. (62 aa)    
Predicted Functional Partners:
ggcx
HTTM domain-containing protein.
   
  
 0.662
thyn1
EVE domain-containing protein.
      
 0.579
pros1
Uncharacterized protein.
   
  
 0.561
LOC103171950
Thioredoxin domain-containing protein.
      
 0.470
f2
Uncharacterized protein; Belongs to the peptidase S1 family.
    
 
 0.458
tpmt
Putative thiopurine S-methyltransferase.
      
 0.441
ENSCMIP00000004961
Uncharacterized protein.
      
 0.420
rnpc3
Uncharacterized protein.
      
 0.420
LOC103181611
Epoxide hydrolase; Biotransformation enzyme that catalyzes the hydrolysis of arene and aliphatic epoxides to less reactive and more water soluble dihydrodiols by the trans addition of water. Belongs to the peptidase S33 family.
      
 0.407
Nqo2
Flavodoxin_2 domain-containing protein.
      
 0.403
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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