STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000004661Uncharacterized protein. (596 aa)    
Predicted Functional Partners:
mpp1
Uncharacterized protein; Belongs to the MAGUK family.
   
  0.602
cask
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
   
  0.602
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.569
itsn2
Uncharacterized protein.
   
 
 0.567
grin1
Uncharacterized protein.
    
 0.484
ENSCMIP00000001851
Uncharacterized protein.
    
 0.459
garem1
CABIT domain-containing protein.
    
 0.459
ENSCMIP00000010050
Uncharacterized protein.
    
 0.459
rab10
Ras-related protein Rab-10-like protein.
    
 0.459
garem2
CABIT domain-containing protein.
    
 0.459
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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