Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebplEXPERA domain-containing protein. (143 aa)    
Predicted Functional Partners:
tsr3
Probable ribosome biogenesis protein; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.682
Tmem158
Uncharacterized protein.
      
 0.677
wdr13
WD_REPEATS_REGION domain-containing protein.
      
 0.673
dhdds
Alkyl transferase; Belongs to the UPP synthase family.
      
 0.665
ppp2r3c
Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma.
      
 0.661
itm2b
Integral membrane protein 2B.
      
 0.631
sc5d
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.613
Nufip2
Uncharacterized protein.
      
 0.613
dhcr7
Uncharacterized protein.
   
  
 0.607
dhcr24
FAD-binding PCMH-type domain-containing protein.
   
 
 0.602
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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