Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Vps45Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (246 aa)    
Predicted Functional Partners:
rbsn
FYVE-type domain-containing protein.
    
 0.999
stx16
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.983
vti1a
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.976
stx6
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.962
vti1b
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.943
vps18
Pep3_Vps18 domain-containing protein.
    
 0.928
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.894
cog4
Cog4 domain-containing protein.
   
 
 0.886
ykt6
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 
 0.873
vps33b
Vacuolar protein sorting 33-like B; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.860
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.