ENSCMIP00000004771 protein (Callorhinchus milii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000004771	ENSCMIP00000006177	ENSCMIP00000004771	ENSCMIP00000006177	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Connexin_CCC domain-containing protein.	0.657
ENSCMIP00000004771	LOC103181932	ENSCMIP00000004771	ENSCMIP00000006652	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Uncharacterized protein.	0.675
ENSCMIP00000004771	cdk1	ENSCMIP00000004771	ENSCMIP00000047630	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Cyclin-dependent kinase 1-like protein; Belongs to the protein kinase superfamily.	0.900
ENSCMIP00000004771	gja1	ENSCMIP00000004771	ENSCMIP00000012608	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.910
ENSCMIP00000004771	gja4	ENSCMIP00000004771	ENSCMIP00000017194	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.646
ENSCMIP00000004771	gjc1	ENSCMIP00000004771	ENSCMIP00000018834	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.806
ENSCMIP00000004771	gjc2	ENSCMIP00000004771	ENSCMIP00000019593	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.776
ENSCMIP00000004771	gjd2	ENSCMIP00000004771	ENSCMIP00000013582	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.901
ENSCMIP00000004771	mapk1	ENSCMIP00000004771	ENSCMIP00000032576	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.900
ENSCMIP00000004771	tjp1	ENSCMIP00000004771	ENSCMIP00000025306	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Uncharacterized protein; Belongs to the MAGUK family.	0.938
ENSCMIP00000006177	ENSCMIP00000004771	ENSCMIP00000006177	ENSCMIP00000004771	Connexin_CCC domain-containing protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.657
ENSCMIP00000006177	LOC103181932	ENSCMIP00000006177	ENSCMIP00000006652	Connexin_CCC domain-containing protein.	Uncharacterized protein.	0.598
ENSCMIP00000006177	gja1	ENSCMIP00000006177	ENSCMIP00000012608	Connexin_CCC domain-containing protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.581
ENSCMIP00000006177	gja4	ENSCMIP00000006177	ENSCMIP00000017194	Connexin_CCC domain-containing protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.640
ENSCMIP00000006177	gjc1	ENSCMIP00000006177	ENSCMIP00000018834	Connexin_CCC domain-containing protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.598
ENSCMIP00000006177	gjc2	ENSCMIP00000006177	ENSCMIP00000019593	Connexin_CCC domain-containing protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.801
ENSCMIP00000006177	gjd2	ENSCMIP00000006177	ENSCMIP00000013582	Connexin_CCC domain-containing protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.657
LOC103181932	ENSCMIP00000004771	ENSCMIP00000006652	ENSCMIP00000004771	Uncharacterized protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.675
LOC103181932	ENSCMIP00000006177	ENSCMIP00000006652	ENSCMIP00000006177	Uncharacterized protein.	Connexin_CCC domain-containing protein.	0.598
LOC103181932	gja1	ENSCMIP00000006652	ENSCMIP00000012608	Uncharacterized protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.577