Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
senp8ULP_PROTEASE domain-containing protein. (215 aa)    
Predicted Functional Partners:
cul1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.933
acmsd
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). Belongs to the metallo-dependent hydrolases superfamily.
    
 0.833
pigl
Uncharacterized protein.
    
 0.830
aco2
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 
 0.824
ireb2
Iron-responsive element-binding protein 2; Belongs to the aconitase/IPM isomerase family.
  
 
 0.824
aco1
Uncharacterized protein; Belongs to the aconitase/IPM isomerase family.
  
 
 0.824
pstpip2
Proline-serine-threonine phosphatase-interacting protein 2-like protein.
    
   0.794
uchl3
Ubiquitin carboxyl-terminal hydrolase.
    
 0.761
uchl1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.761
trmt5
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
    
   0.751
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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