Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
LOC103182494Protein kinase domain-containing protein. (574 aa)    
Predicted Functional Partners:
dcaf1
LisH domain-containing protein.
    
 
 0.761
atm
Non-specific serine/threonine protein kinase.
    
 0.743
dcaf7
WD_REPEATS_REGION domain-containing protein.
   
 
 0.656
rps27a
Ubiquitin-like domain-containing protein.
   
  0.652
mdm2
RING-type domain-containing protein; Belongs to the MDM2/MDM4 family.
    
 0.630
eef2
Tr-type G domain-containing protein.
    
 
 0.588
ubr5
Uncharacterized protein.
   
 
 0.582
ddb1
CPSF_A domain-containing protein.
    
 
 0.569
fbxw11
Uncharacterized protein.
    
 
 0.562
hdac3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 
 0.500
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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