STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103173854Uncharacterized protein. (175 aa)    
Predicted Functional Partners:
mpp1
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.714
cask
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.714
tekt2
Uncharacterized protein.
   
 
 0.696
tekt3
Uncharacterized protein.
   
 
 0.686
mns1
Uncharacterized protein.
    
 0.613
efhc2
Uncharacterized protein.
   
 
 0.610
armc4
Uncharacterized protein.
   
 
 0.603
ENSCMIP00000006760
Uncharacterized protein.
   
 
 0.580
fam183a
Uncharacterized protein.
    
 
 0.580
cfap52
WD repeat domain 16.
   
  0.571
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.