il10 protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

il10

Uncharacterized protein. (189 aa)

Predicted Functional Partners:

il10ra

0.997

LOC103186761

0.986

LOC103186763

0.986

ENSCMIP00000039326

0.986

ifng

0.974

ENSCMIP00000022992

0.961

ENSCMIP00000001374

0.897

irf4

0.887

stat3

0.882

myd88

0.874

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000001374	ENSCMIP00000022992	ENSCMIP00000001374	ENSCMIP00000022992	Uncharacterized protein.	Uncharacterized protein.	0.699
ENSCMIP00000001374	ifng	ENSCMIP00000001374	ENSCMIP00000024377	Uncharacterized protein.	Uncharacterized protein.	0.665
ENSCMIP00000001374	il10	ENSCMIP00000001374	ENSCMIP00000004896	Uncharacterized protein.	Uncharacterized protein.	0.897
ENSCMIP00000022992	ENSCMIP00000001374	ENSCMIP00000022992	ENSCMIP00000001374	Uncharacterized protein.	Uncharacterized protein.	0.699
ENSCMIP00000022992	ifng	ENSCMIP00000022992	ENSCMIP00000024377	Uncharacterized protein.	Uncharacterized protein.	0.940
ENSCMIP00000022992	il10	ENSCMIP00000022992	ENSCMIP00000004896	Uncharacterized protein.	Uncharacterized protein.	0.961
ENSCMIP00000022992	myd88	ENSCMIP00000022992	ENSCMIP00000019764	Uncharacterized protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.942
ENSCMIP00000022992	stat3	ENSCMIP00000022992	ENSCMIP00000006620	Uncharacterized protein.	Signal transducer and activator of transcription.	0.489
ENSCMIP00000039326	LOC103186761	ENSCMIP00000039326	ENSCMIP00000039320	Uncharacterized protein.	Uncharacterized protein.	0.910
ENSCMIP00000039326	LOC103186763	ENSCMIP00000039326	ENSCMIP00000039323	Uncharacterized protein.	Uncharacterized protein.	0.900
ENSCMIP00000039326	il10	ENSCMIP00000039326	ENSCMIP00000004896	Uncharacterized protein.	Uncharacterized protein.	0.986
ENSCMIP00000039326	il10ra	ENSCMIP00000039326	ENSCMIP00000014918	Uncharacterized protein.	Uncharacterized protein.	0.876
ENSCMIP00000039326	stat3	ENSCMIP00000039326	ENSCMIP00000006620	Uncharacterized protein.	Signal transducer and activator of transcription.	0.774
LOC103186761	ENSCMIP00000039326	ENSCMIP00000039320	ENSCMIP00000039326	Uncharacterized protein.	Uncharacterized protein.	0.910
LOC103186761	LOC103186763	ENSCMIP00000039320	ENSCMIP00000039323	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC103186761	il10	ENSCMIP00000039320	ENSCMIP00000004896	Uncharacterized protein.	Uncharacterized protein.	0.986
LOC103186761	il10ra	ENSCMIP00000039320	ENSCMIP00000014918	Uncharacterized protein.	Uncharacterized protein.	0.837
LOC103186761	stat3	ENSCMIP00000039320	ENSCMIP00000006620	Uncharacterized protein.	Signal transducer and activator of transcription.	0.774
LOC103186763	ENSCMIP00000039326	ENSCMIP00000039323	ENSCMIP00000039326	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC103186763	LOC103186761	ENSCMIP00000039323	ENSCMIP00000039320	Uncharacterized protein.	Uncharacterized protein.	0.900