tia1 protein (Callorhinchus milii) - STRING interaction network

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Score

tia1

Uncharacterized protein. (382 aa)

Predicted Functional Partners:

dcp1a

0.741

atxn2

0.682

fxr1

0.673

SNRPC

0.647

u2af2

0.645

g3bp1

0.644

suz12

0.622

qki

0.614

tardbp

0.613

LOC103172223

0.591

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103172223	SNRPC	ENSCMIP00000006950	ENSCMIP00000032768	Serine/arginine-rich splicing factor 3.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.472
LOC103172223	fxr1	ENSCMIP00000006950	ENSCMIP00000032834	Serine/arginine-rich splicing factor 3.	Uncharacterized protein.	0.578
LOC103172223	tardbp	ENSCMIP00000006950	ENSCMIP00000004414	Serine/arginine-rich splicing factor 3.	TAR DNA-binding protein 43-like protein.	0.522
LOC103172223	tia1	ENSCMIP00000006950	ENSCMIP00000004897	Serine/arginine-rich splicing factor 3.	Uncharacterized protein.	0.591
LOC103172223	u2af2	ENSCMIP00000006950	ENSCMIP00000006457	Serine/arginine-rich splicing factor 3.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.987
SNRPC	LOC103172223	ENSCMIP00000032768	ENSCMIP00000006950	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	Serine/arginine-rich splicing factor 3.	0.472
SNRPC	tardbp	ENSCMIP00000032768	ENSCMIP00000004414	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	TAR DNA-binding protein 43-like protein.	0.465
SNRPC	tia1	ENSCMIP00000032768	ENSCMIP00000004897	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	Uncharacterized protein.	0.647
SNRPC	u2af2	ENSCMIP00000032768	ENSCMIP00000006457	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.934
atxn2	dcp1a	ENSCMIP00000014583	ENSCMIP00000026645	LsmAD domain-containing protein.	mRNA_decap_C domain-containing protein.	0.581
atxn2	fxr1	ENSCMIP00000014583	ENSCMIP00000032834	LsmAD domain-containing protein.	Uncharacterized protein.	0.658
atxn2	g3bp1	ENSCMIP00000014583	ENSCMIP00000000822	LsmAD domain-containing protein.	Uncharacterized protein.	0.818
atxn2	tardbp	ENSCMIP00000014583	ENSCMIP00000004414	LsmAD domain-containing protein.	TAR DNA-binding protein 43-like protein.	0.841
atxn2	tia1	ENSCMIP00000014583	ENSCMIP00000004897	LsmAD domain-containing protein.	Uncharacterized protein.	0.682
dcp1a	atxn2	ENSCMIP00000026645	ENSCMIP00000014583	mRNA_decap_C domain-containing protein.	LsmAD domain-containing protein.	0.581
dcp1a	tia1	ENSCMIP00000026645	ENSCMIP00000004897	mRNA_decap_C domain-containing protein.	Uncharacterized protein.	0.741
fxr1	LOC103172223	ENSCMIP00000032834	ENSCMIP00000006950	Uncharacterized protein.	Serine/arginine-rich splicing factor 3.	0.578
fxr1	atxn2	ENSCMIP00000032834	ENSCMIP00000014583	Uncharacterized protein.	LsmAD domain-containing protein.	0.658
fxr1	g3bp1	ENSCMIP00000032834	ENSCMIP00000000822	Uncharacterized protein.	Uncharacterized protein.	0.808
fxr1	qki	ENSCMIP00000032834	ENSCMIP00000008629	Uncharacterized protein.	KH domain-containing protein.	0.463