psmf1 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

psmf1

Uncharacterized protein. (262 aa)

Predicted Functional Partners:

ufd1

0.805

psma1

0.802

psmb4

0.794

psmb1

0.776

LOC103171909

0.753

psmb2

0.753

psmc6

0.752

LOC103174266

0.747

LOC103171675

0.747

psmb7

0.747

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103171675	LOC103171909	ENSCMIP00000012600	ENSCMIP00000002415	Pr_beta_C domain-containing protein.	Proteasome subunit alpha type.	0.972
LOC103171675	LOC103174266	ENSCMIP00000012600	ENSCMIP00000001977	Pr_beta_C domain-containing protein.	Uncharacterized protein.	0.900
LOC103171675	psma1	ENSCMIP00000012600	ENSCMIP00000034109	Pr_beta_C domain-containing protein.	Proteasome endopeptidase complex.	0.979
LOC103171675	psmb1	ENSCMIP00000012600	ENSCMIP00000006386	Pr_beta_C domain-containing protein.	Proteasome subunit beta.	0.984
LOC103171675	psmb2	ENSCMIP00000012600	ENSCMIP00000012254	Pr_beta_C domain-containing protein.	Proteasome subunit beta.	0.978
LOC103171675	psmb4	ENSCMIP00000012600	ENSCMIP00000005209	Pr_beta_C domain-containing protein.	Proteasome subunit beta.	0.981
LOC103171675	psmb7	ENSCMIP00000012600	ENSCMIP00000028330	Pr_beta_C domain-containing protein.	Proteasome subunit beta.	0.902
LOC103171675	psmc6	ENSCMIP00000012600	ENSCMIP00000025337	Pr_beta_C domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.931
LOC103171675	psmf1	ENSCMIP00000012600	ENSCMIP00000004925	Pr_beta_C domain-containing protein.	Uncharacterized protein.	0.747
LOC103171675	ufd1	ENSCMIP00000012600	ENSCMIP00000033040	Pr_beta_C domain-containing protein.	Ubiquitin fusion degradation protein 1-like protein.	0.593
LOC103171909	LOC103171675	ENSCMIP00000002415	ENSCMIP00000012600	Proteasome subunit alpha type.	Pr_beta_C domain-containing protein.	0.972
LOC103171909	LOC103174266	ENSCMIP00000002415	ENSCMIP00000001977	Proteasome subunit alpha type.	Uncharacterized protein.	0.972
LOC103171909	psma1	ENSCMIP00000002415	ENSCMIP00000034109	Proteasome subunit alpha type.	Proteasome endopeptidase complex.	0.999
LOC103171909	psmb1	ENSCMIP00000002415	ENSCMIP00000006386	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
LOC103171909	psmb2	ENSCMIP00000002415	ENSCMIP00000012254	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
LOC103171909	psmb4	ENSCMIP00000002415	ENSCMIP00000005209	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
LOC103171909	psmb7	ENSCMIP00000002415	ENSCMIP00000028330	Proteasome subunit alpha type.	Proteasome subunit beta.	0.972
LOC103171909	psmc6	ENSCMIP00000002415	ENSCMIP00000025337	Proteasome subunit alpha type.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
LOC103171909	psmf1	ENSCMIP00000002415	ENSCMIP00000004925	Proteasome subunit alpha type.	Uncharacterized protein.	0.753
LOC103171909	ufd1	ENSCMIP00000002415	ENSCMIP00000033040	Proteasome subunit alpha type.	Ubiquitin fusion degradation protein 1-like protein.	0.663