STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103173866Uncharacterized protein. (167 aa)    
Predicted Functional Partners:
ENSCMIP00000040974
Uncharacterized protein.
 
     0.937
LOC103173342
Uncharacterized protein.
 
     0.928
ENSCMIP00000004600
Calponin-homology (CH) domain-containing protein.
 
      0.860
sptan1
Uncharacterized protein.
   
0.812
LOC103172810
PH domain-containing protein.
 
     0.737
itsn2
Uncharacterized protein.
     
 0.614
LOC103190613
Uncharacterized protein.
 
  
  0.591
actn2
Uncharacterized protein.
 
  
  0.546
actn1
Uncharacterized protein.
 
  
  0.491
itsn1
Uncharacterized protein.
     
 0.466
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.