Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103186981Uncharacterized protein. (210 aa)    
Predicted Functional Partners:
rbm39
Uncharacterized protein.
    
 0.675
lemd3
LEM domain-containing protein.
    
 0.675
LOC103191459
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.534
ppp2r2b
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.534
smarce1
HMG box domain-containing protein.
   
 
 0.426
LOC103174054
IF rod domain-containing protein.
    
 0.404
ENSCMIP00000000404
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 0.404
LOC103173914
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 0.404
LOC103187531
Uncharacterized protein; Belongs to the intermediate filament family.
    
 0.404
LOC103172839
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 0.404
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: medium (46%) [HD]