Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wdr77Uncharacterized protein. (262 aa)    
Predicted Functional Partners:
clns1a
Uncharacterized protein.
   
 0.999
Prmt5
PRMT5_TIM domain-containing protein.
   
 0.994
ENSCMIP00000002781
PRMT5_TIM domain-containing protein.
   
 0.992
snrpd3
Small nuclear ribonucleoprotein Sm D3.
    
 0.980
riok1
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
   
 
 0.972
cpsf1
Uncharacterized protein.
   
 0.931
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.930
cpsf3
Uncharacterized protein.
   
 0.930
sympk
Uncharacterized protein.
    
 0.930
rbbp6
Uncharacterized protein.
   
 0.929
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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