Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mef2aMyocyte-specific enhancer factor 2A. (473 aa)    
Predicted Functional Partners:
ENSCMIP00000009700
MADS-box domain-containing protein.
  
 
0.983
mef2c
Myocyte-specific enhancer factor 2C-like protein.
  
  
0.903
Nkx2-5
Homeobox domain-containing protein.
    
 0.889
ep300
Uncharacterized protein.
   
 
 0.844
Myog
BHLH domain-containing protein.
    
 0.815
myod1
Myogenic factor.
    
 0.779
tbx20
T-box transcription factor TBX20.
    
 0.728
mapk14
Mitogen-activated protein kinase.
    
 0.707
LOC103179136
Mitogen-activated protein kinase.
    
 0.707
mapk11
Mitogen-activated protein kinase.
    
 0.707
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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