STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103173881PX domain-containing protein. (86 aa)    
Predicted Functional Partners:
ENSCMIP00000036159
TPR_REGION domain-containing protein.
   
 0.911
ENSCMIP00000042148
TPR_REGION domain-containing protein.
   
 0.911
LOC103175997
Uncharacterized protein.
   
 0.781
sh3rf3
Uncharacterized protein.
   
 0.545
vav3
Guanine nucleotide exchange factor VAV3.
   
 
  0.540
vav2
Uncharacterized protein.
   
 
  0.540
ENSCMIP00000021372
Uncharacterized protein.
   
 0.523
sh3d19
Uncharacterized protein.
   
 0.523
sorbs2
Uncharacterized protein.
   
 0.523
sorbs1
Uncharacterized protein.
   
 0.523
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.