Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
znhit1Uncharacterized protein. (82 aa)    
Predicted Functional Partners:
ENSCMIP00000002932
Uncharacterized protein.
    
 
 0.985
actr6
Uncharacterized protein; Belongs to the actin family.
   
 
 0.984
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.983
yeats4
Uncharacterized protein.
   
 
 0.983
ENSCMIP00000004369
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.980
dmap1
Uncharacterized protein.
   
 
 0.968
ep400
Uncharacterized protein.
    
 
 0.963
LOC103187764
Histone H2A; Belongs to the histone H2A family.
    
 
 0.956
actl6a
Actin-like 6A; Belongs to the actin family.
    
 
 0.947
cfdp1
Craniofacial development protein 1; May play a role during embryogenesis.
    
 
 0.944
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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